The 8 Best Sourdough Muffin Recipes (Easy & Simple)
Sourdough muffin recipes are soft, fluffy, and have that signature tang of the sourdough starter. There are endless variations of sourdough muffins, so I have compiled the 8 best recipes for you to try!
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You can use either active sourdough starter or sourdough discard for these muffin recipes.
Whether you are looking for an easy and nutritious breakfast or a healthy snack, any of these muffin recipes will do the trick!

Why make Sourdough Muffins?
Versatile – There are so many variations of muffin recipes. Whether you want a savory muffin or a sweet one, you will have no problems finding one that suits you!
Flavor – Sourdough starter gives a wonderful tangy note to the muffins and a depth of flavor that you can’t get without it.
Economical – These recipes use up sourdough starter or discard and simple ingredients for a quick and healthy meal or snack that is quite economical to make.
Most of these muffin recipes are made with fresh milled flour, however you can substitute with all purpose flour 1:1.
How to store leftover muffins
Store cooled muffins in a plastic bag or airtight container at room temperature for 3-4 days.
Freeze muffins in a freezer safe bag for up to 3 months.
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My favorite muffin tin is the USA PAN MUFFIN TIN
To scoop the muffin batter into the muffin cups, I always use a COOKIE SCOOP
Basic Ingredients for making Sourdough Muffins
- Flour – I use fresh milled flour exclusively in my kitchen, however you can use white flour 1:1 if you want.
- Oil – I use olive oil, but substitutes include avocado oil, melted butter, or melted coconut oil.
- Sweetener – I prefer to use raw sugar, honey, or maple syrup in my muffins.
- Sourdough Starter – You can use active sourdough starter or sourdough starter discard for these recipes.
- Salt
- Baking Soda and Baking Powder
- Milk – You can use any milk or dairy milk alternative in these recipes.
- Eggs
My 8 Best Sourdough Muffin Recipes
A great way to get a quick breakfast on the table is to make muffins! This compilation is made with sourdough starter for a depth of flavor you and your family will love! You can use active starter or discard for most of these muffin recipes, as well!
All of these delicious muffins will make a great breakfast or afternoon snack!
Looking for an easy sourdough bread recipe? TRY THIS ONE!
Sourdough Chocolate Chip Muffins (#1)
Who doesn’t love a chocolate chip muffin? These chocolate chip sourdough muffins are long fermented for deep flavor and is perfectly sweet! Serve with eggs or a protein smoothie for a delicious breakfast or as a wholesome quick snack.
And, if you want to add more chocolate chips, I won’t tell:)
These muffins are long fermented for 8-12 hours for all the healthy benefits of sourdough! For best results, use active bubbly sourdough starter for long fermented recipes.

Looking for more sourdough recipes? CLICK HERE!
Sourdough Breakfast Muffins (#2)
Quick and easy to make, these breakfast muffins are high in protein and packed with flavor! A perfectly balanced breakfast that the whole family will love!

Sourdough Apple Pie Muffins (#3)
The perfect fall treat! Warm spices, apples, and tangy sourdough starter make for a comforting muffin that pairs so well with an afternoon tea or espresso!

If you are new to sourdough and want to start your own sourdough starter, START HERE!
Sourdough Discard Cranberry Orange Muffins (#4)
If you want a muffin that is perfect for the holiday morning breakfasts, you have to make these sourdough discard cranberry orange muffins! The sweetness of the orange and the tang of the cranberries and sourdough make a muffin with deep flavor that will be a family favorite for sure!

Sourdough Pumpkin Muffins with Fresh Milled Flour (#5)
These sourdough pumpkin muffins are made with freshly milled flour and check all the boxes for a healthy, delicious fall treat!

Sourdough English Muffins (#6)
I have always love english muffins. They are so versatile and can be used in place of sandwich bread in a pinch. I have also always loved sourdough and freshly milled flour. So, it just made sense to convert my sourdough english muffin recipe to fresh milled flour!
Whole grains make these muffins even more flavorful and healthy!

Sourdough Blueberry Muffins with Crumble Topping (#7)
One of our favorite ways to have fresh blueberries is in this sourdough blueberry muffin recipe. The crumble topping adds a little extra sweetness making them so delicious and is a welcome addition to any of these muffin recipes!

Sourdough Raspberry Muffins (#8)
A sweet and delicious treat using fresh raspberries? YES! These sourdough raspberry muffins are easy to make and burst with raspberry flavor in every bite! The tang of the sourdough compliments the sweetness of the berries so well!
